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(-) Description

Title :  SOLUTION STRUCTURE OF THE CHANNEL-FORMER ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC)
 
Authors :  T. A. Balashova, Z. O. Shenkarev, A. A. Tagaev, T. V. Ovchinnikova, J. Ra A. S. Arseniev
Date :  13 Dec 99  (Deposition) - 03 Feb 00  (Release) - 27 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Zrevamicin, Peptaibol, Antibacterial, Antifungal, Antibiotic, Bent Helix (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. A. Balashova, Z. O. Shenkarev, A. A. Tagaev, T. V. Ovchinnikova, J. Raap, A. S. Arseniev
Nmr Structure Of The Channel-Former Zervamicin Iib In Isotropic Solvents.
Febs Lett. V. 466 333 2000
PubMed-ID: 10682854  |  Reference-DOI: 10.1016/S0014-5793(99)01707-X

(-) Compounds

Molecule 1 - ZERVAMICIN IIB
    ChainsA
    Organism ScientificEMERICELLOPSIS SALMOSYNNEMATA
    Organism Taxid118885

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 9)

NMR Structure (5, 9)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2AIB4Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
3DIV1Mod. Amino AcidD-ISOVALINE
4HYP2Mod. Amino Acid4-HYDROXYPROLINE
5PHL1Mod. Amino AcidL-PHENYLALANINOL
NMR Structure * (5, 9)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2AIB4Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
3DIV1Mod. Amino AcidD-ISOVALINE
4HYP2Mod. Amino Acid4-HYDROXYPROLINE
5PHL1Mod. Amino AcidL-PHENYLALANINOL

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1DLZ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1DLZ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:17
                                                
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
                 Transcript ----------------- Transcript
                  1dlz A  0 xWIQxITxLxpQxpxPx 16
                            |   |  | 9| ||| |
                            |   |  | || ||| |
                            0-ACE  | || ||| |
                                4-DIV|| ||| |
                                   7-AIB||| |
                                     9-AIB| |
                                     10-HYP |
                                       12-AIB
                                        13-HYP
                                         14-AIB

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 Classification and Annotation

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NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1amt CRYSTAL STRUCTURE OF THE PEPTAIBOL ALAMETHICIN
1ee7 SOLUTION STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES
1gq0 SOLUTION STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I
1ih9 SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB BOUND TO DPC MICELLES
1joh CRYSTAL STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I
1m24 CRYSTAL STRUCTURE OF THE PEPTAIBOL TRICHOTOXIN_A50E
1ob4 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL A
1ob6 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL B
1ob7 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL C
1r9u SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN METHANOL