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(-) Description

Title :  THE CRYSTAL STRUCTURE OF OSPA MUTANT
 
Authors :  K. Makabe, M. Biancalana, S. Koide
Date :  06 Sep 08  (Deposition) - 08 Sep 09  (Release) - 09 Mar 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.49
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Beta-Sheet, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Biancalana, K. Makabe, S. Koide
Minimalist Design Of Water-Soluble Cross-{Beta} Architecture.
Proc. Natl. Acad. Sci. Usa V. 107 3469 2010
PubMed-ID: 20133689  |  Reference-DOI: 10.1073/PNAS.0912654107

(-) Compounds

Molecule 1 - OUTER SURFACE PROTEIN A
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET24A
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    Organism ScientificBORRELIA BURGDORFERI
    Organism Taxid139

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1P6G3Ligand/IonHEXAETHYLENE GLYCOL

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:202 , PHE A:203 , GLY A:218 , ASN B:127BINDING SITE FOR RESIDUE P6G A 1
2AC2SOFTWARELYS B:204 , ILE B:206 , TYR B:216BINDING SITE FOR RESIDUE P6G B 2
3AC3SOFTWAREASN A:127 , SER A:133BINDING SITE FOR RESIDUE P6G A 3

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EEX)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Lys A:117 -Asp A:118
2Lys A:119 -Ser A:120
3Lys B:117 -Asp B:118
4Lys B:119 -Ser B:120

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3EEX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3EEX)

(-) Exons   (0, 0)

(no "Exon" information available for 3EEX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:316
                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee...eeeee.........eeeeeee..eeeeeee......eeeeee.....eeeeee......eeeeee......eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeee.......eeeeee....eeeeee....eeeeeee..eeeeeee.....eeeeeee........eeeeee....eeeeee..eeeeeeee.....eeeee............ee..hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eex A  27 KNSVSVDLPGSMKVLVSKSSNADGKYDLIATVDALELSGTSDKNNGSGVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSKDKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSKNISKSGEVSVELNDTDSSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTSSNTITVQQYDSNGTSLEGSAVEITKLDEIKNALK 342
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336      

Chain B from PDB  Type:PROTEIN  Length:316
                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....eeeee........eeeeee....eeeeee......eeeeee.....eeeeee......eeeeee......eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeeee.....eeeeeee.....eeeee.......eeeeeee..eeeeeeee..eeeeeeee..eeeeeee.....eeeeeee........eeeeee....eeeeee..eeeeeeee.....eeeee............ee..hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eex B  27 KNSVSVDLPGSMKVLVSKSSNADGKYDLIATVDALELSGTSDKNNGSGVLEGVKADASKVKLTISDDLGQTTLEVFKSDGSTLVSKKVTSKDKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADKSSTFELFNEKGELSFKLITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSKNISKSGEVSVELNDTDSSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTSSNTITVQQYDSNGTSLEGSAVEITKLDEIKNALK 342
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336      

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3EEX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EEX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EEX)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3EEX)

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    Lys A:117 - Asp A:118   [ RasMol ]  
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