4ENB - JenaLib

Title :   CRYSTAL STRUCTURE OF FLUORIDE RIBOSWITCH, BOUND TO IRIDIUM

Authors :   A. M. Ren, K. R. Rajashankar, D. J. Patel

Date :   12 Apr 12 (Deposition) - 09 May 12 (Release) - 13 Feb 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A

Keywords :   Pseudoknot, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Ren, K. R. Rajashankar, D. J. Patel
Fluoride Ion Encapsulation By Mg2+ Ions And Phosphates In A Fluoride Riboswitch.
Nature V. 486 85 2012
PubMed-ID: 22678284 | Reference-DOI: 10.1038/NATURE11152

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 14)

Sites (13, 13)

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HOH A:206 , HOH A:207 , HOH A:213	BINDING SITE FOR RESIDUE IRI A 101
02	AC2	SOFTWARE	G A:35 , HOH A:218	BINDING SITE FOR RESIDUE IRI A 102
03	AC3	SOFTWARE	HOH A:212 , HOH A:217 , HOH A:219	BINDING SITE FOR RESIDUE IRI A 103
04	AC4	SOFTWARE	G A:10 , HOH A:202	BINDING SITE FOR RESIDUE IRI A 104
05	AC5	SOFTWARE	G A:5 , A A:6 , U A:7 , MG A:110 , MG A:113 , HOH A:226 , HOH A:230 , HOH A:231	BINDING SITE FOR RESIDUE K A 105
06	AC6	SOFTWARE	A A:6 , U A:7 , U A:41 , G A:42 , MG A:110 , MG A:112 , MG A:113 , HOH A:226 , HOH A:232 , HOH A:233 , HOH A:235	BINDING SITE FOR RESIDUE F A 106
07	AC7	SOFTWARE	G A:2 , G A:3 , A A:19	BINDING SITE FOR RESIDUE MG A 107
08	AC8	SOFTWARE	GTP A:1 , C A:18 , HOH A:216	BINDING SITE FOR RESIDUE MG A 108
09	AC9	SOFTWARE	HOH A:212 , HOH A:220	BINDING SITE FOR RESIDUE MG A 109
10	BC1	SOFTWARE	U A:7 , G A:8 , K A:105 , F A:106 , MG A:112 , MG A:113 , HOH A:226 , HOH A:232 , HOH A:235	BINDING SITE FOR RESIDUE MG A 110
11	BC2	SOFTWARE	A A:40 , HOH A:214 , HOH A:221 , HOH A:223 , HOH A:224 , HOH A:225	BINDING SITE FOR RESIDUE MG A 111
12	BC3	SOFTWARE	A A:6 , U A:7 , U A:41 , G A:42 , F A:106 , MG A:110 , MG A:113 , HOH A:222	BINDING SITE FOR RESIDUE MG A 112
13	BC4	SOFTWARE	A A:6 , U A:7 , G A:42 , K A:105 , F A:106 , MG A:110 , MG A:112 , HOH A:226 , HOH A:233 , HOH A:234	BINDING SITE FOR RESIDUE MG A 113

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:RNA  Length:52
                                                                                   
                  4enb A  1 gGGCGAUGAGGCCCGCCCAAACUGCCCUGAAAAGGGCUGAUGGCCUCUACUG 52
                            |       10        20        30        40        50  
                            |                                                   
                            1-GTP

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Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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