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(-) Description

Title :  CRYSTAL STRUCTURE OF YEAST MONOTHIOL GLUTAREDOXIN GRX6 IN COMPLEX WITH A GLUTATHIONE-COORDINATED [2FE-2S] CLUSTER
 
Authors :  M. Abdalla, Y. -N. Dai, C. -B. Chi, W. Cheng, D. -D. Cao, K. Zhou, W. Ali, Y. Z. Zhou
Date :  31 Mar 16  (Deposition) - 19 Oct 16  (Release) - 19 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.46
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Glutaredoxin, Iron-Sulfur Cluster, Saccharomyces Cerevisiae, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Abdalla, Y. -N. Dai, C. -B. Chi, W. Cheng, D. -D. Cao, K. Zhou, W. Ali, Y. Chen, C. -Z. Zhou
Crystal Structure Of Yeast Monothiol Glutaredoxin Grx6 In Complex With A Glutathione-Coordinated [2Fe-2S] Cluster
Acta Crystallogr. , Sect. F V. 72 732 2016
PubMed-ID: 27710937  |  Reference-DOI: 10.1107/S2053230X16013418

(-) Compounds

Molecule 1 - MONOTHIOL GLUTAREDOXIN-6
    Chains: A
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: YEAST
    Expression System Taxid: 4932
    Fragment: UNP RESIDUES 37-231
    Gene: GRX6
    Organism Scientific: SACCHAROMYCES CEREVISIAE S288C
    Organism Taxid: 559292
    Strain: S288C

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
2GSH1Ligand/IonGLUTATHIONE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
2GSH2Ligand/IonGLUTATHIONE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:136 , TYR A:138 , GSH A:302binding site for residue FES A 301
2AC2SOFTWARELYS A:133 , THR A:135 , SER A:137 , TYR A:138 , GLN A:171 , THR A:182 , VAL A:183 , GLY A:195 , ASN A:196 , GLU A:197 , GLU A:198 , FES A:301 , HOH A:401binding site for residue GSH A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5J3R)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ile A:153 -Pro A:154
2Val A:183 -Pro A:184

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:114
                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.eeeee...hhhhhhhhhhhhhheeee...eeee.....hhhhhhhhhhhhhh.....eeee..ee..hhhhhhhhhhh.hhhhhhhhh.....eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 5j3r A 112 AFNVQKEYSLILDLSPIIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNGVSRGGNEEIKKLHTQGKLLESLQVWSDGKFSVEQR 225
                                   121       131       141       151       161       171       181       191       201       211       221
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5J3R)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (19, 19)

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        GLRX6_YEAST | Q12438: 3l4n

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