'IMB

SUPPLEMENTARY MATERIAL

J. Reichert, A, Jabs, P. Slickers, J. Sühnel,
The IMB Jena Image Library of Biological Macromolecules,
Nucleic Acids Research (in press) - 2000 NAR Biological Database Issue


Entry page with automatically generated information only

Each automatically generated entry page of the IMB Jena Image Library of Biological Macromolecules contains, at least, one thumbmail image, two vector graphics and one VRML representations, one Rasmol/Chime and one WebMol visualization. In addition, ligands, active sites, and cis-peptide bonds can be visualized separately. Follow this link to see the complete entry page provided by the Image Library for a protein, the Ustilago sphaerogena ribonuclease U2. On this page one can also find links to the websites of molecular graphics programs used. In Figure 1 the various visualization types are displayed.

Figure 1. Visualization types for automatically generated entry pages (example: Ustilago sphaerogena ribonuclease U2; PDB code: 1rtu).

complete structure
(RasMol, GIF and program)
complete structure
(Molscript, PDF)
complete structure
(WebMol, Java applet)
complete structure
(Molscript, VRML)

1rtu RasMol GIF

1rtu Molscript PDF

1rtu WebMol applet

1rtu Molscript VRML

enlarge image (GIF);
RasMol | Chime link
enlarge image (PDF);
mono | stereo
enlarge image (GIF) ;
WebMol link
enlarge image (GIF) ;
VRML
active site:
Tyr39, His41, Glu62, Arg85, His101
(VRML)
cis-peptide bond:
Tyr39 , Pro40
(RasMol)
ligand:
aspartyl group
(RasMol)
ligand:
sulfate
(VRML)

1rtu active site VRML

1rtu cis-peptide RasMol

1rtu ligand Asp RasMol

1rtu ligand SO4 VRML

enlarge image (GIF) ;
VRML
enlarge image (GIF) ;
Rasmol | Chime link
enlarge image (GIF) ;
RasMol | Chime link
enlarge image (GIF) ;
VRML

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